Carnation DB

Dca38969.1

Annotation

20-exons
f-1
sp|E0CST0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0014g03680#GO:0005634;GO:0004519;GO:0004527;GO:0030145;GO:0006302;GO:0007126#3F2P1C
AT5G54260.1 | Symbols: MRE11, ATMRE11 | DNA repair and meiosis protein (Mre11) | chr5:22032702-22037749 FORWARD LENGTH=720
Repeat List (scaffold42)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38969.1	2	700	700	74	699	71	0
Target_name	Start	End	Length	Cov(%)
sp\|E0CST0_VITVI	10	731	731	98.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38969.1	1	700	700	71.57	700	69	0
Target_name	Start	End	Length	Cov(%)
AT5G54260.1	6	720	720	99.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold42	Augustus	mRNA	176825	183602	.	+	.	ID=Dca38969.1;Parent=Dca38969
scaffold42	Augustus	exon	176825	176953	.	+	.	ID=Dca38969.1.exon1;Parent=Dca38969.1
scaffold42	Augustus	exon	177227	177384	.	+	.	ID=Dca38969.1.exon2;Parent=Dca38969.1
scaffold42	Augustus	exon	178070	178160	.	+	.	ID=Dca38969.1.exon3;Parent=Dca38969.1
scaffold42	Augustus	exon	178710	178829	.	+	.	ID=Dca38969.1.exon4;Parent=Dca38969.1
scaffold42	Augustus	exon	178908	178976	.	+	.	ID=Dca38969.1.exon5;Parent=Dca38969.1
scaffold42	Augustus	exon	179066	179157	.	+	.	ID=Dca38969.1.exon6;Parent=Dca38969.1
scaffold42	Augustus	exon	179291	179393	.	+	.	ID=Dca38969.1.exon7;Parent=Dca38969.1
scaffold42	Augustus	exon	179491	179598	.	+	.	ID=Dca38969.1.exon8;Parent=Dca38969.1
scaffold42	Augustus	exon	179813	179884	.	+	.	ID=Dca38969.1.exon9;Parent=Dca38969.1
scaffold42	Augustus	exon	179993	180070	.	+	.	ID=Dca38969.1.exon10;Parent=Dca38969.1
scaffold42	Augustus	exon	180233	180295	.	+	.	ID=Dca38969.1.exon11;Parent=Dca38969.1
scaffold42	Augustus	exon	180389	180452	.	+	.	ID=Dca38969.1.exon12;Parent=Dca38969.1
scaffold42	Augustus	exon	181012	181094	.	+	.	ID=Dca38969.1.exon13;Parent=Dca38969.1
scaffold42	Augustus	exon	181225	181338	.	+	.	ID=Dca38969.1.exon14;Parent=Dca38969.1
scaffold42	Augustus	exon	181500	181589	.	+	.	ID=Dca38969.1.exon15;Parent=Dca38969.1
scaffold42	Augustus	exon	181719	181781	.	+	.	ID=Dca38969.1.exon16;Parent=Dca38969.1
scaffold42	Augustus	exon	182231	182487	.	+	.	ID=Dca38969.1.exon17;Parent=Dca38969.1
scaffold42	Augustus	exon	182919	183024	.	+	.	ID=Dca38969.1.exon18;Parent=Dca38969.1
scaffold42	Augustus	exon	183232	183441	.	+	.	ID=Dca38969.1.exon19;Parent=Dca38969.1
scaffold42	Augustus	exon	183570	183602	.	+	.	ID=Dca38969.1.exon20;Parent=Dca38969.1