Carnation DB

Dca38978.1

Annotation

5-exons
f-1
sp|B9N295_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_783911#GO:0005634;GO:0003677#1F0P1C
Os01t0780800-01 SAND domain containing protein.
Repeat List (scaffold42)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38978.1	115	340	364	29.12	226	47	1e-58
Target_name	Start	End	Length	Cov(%)
sp\|B9N295_POPTR	12	235	235	95.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38978.1	115	338	364	29.12	224	48	2e-57
Target_name	Start	End	Length	Cov(%)
Os01t0780800-01	12	233	236	94.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold42	Augustus	mRNA	245051	249197	.	+	.	ID=Dca38978.1;Parent=Dca38978
scaffold42	Augustus	exon	245051	245123	.	+	.	ID=Dca38978.1.exon1;Parent=Dca38978.1
scaffold42	Augustus	exon	246632	246837	.	+	.	ID=Dca38978.1.exon2;Parent=Dca38978.1
scaffold42	Augustus	exon	246968	247205	.	+	.	ID=Dca38978.1.exon3;Parent=Dca38978.1
scaffold42	Augustus	exon	248522	248852	.	+	.	ID=Dca38978.1.exon4;Parent=Dca38978.1
scaffold42	Augustus	exon	248951	249197	.	+	.	ID=Dca38978.1.exon5;Parent=Dca38978.1