Carnation DB

Dca3899.1

Annotation

6-exons
f-1
sp|F6GXK2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0052g00030#GO:0003723#1F0P0C
AT4G26000.1 | Symbols: PEP | RNA-binding KH domain-containing protein | chr4:13197280-13199539 FORWARD LENGTH=495
Repeat List (scaffold114)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3899.1	12	414	442	57.01	403	63	3e-135
Target_name	Start	End	Length	Cov(%)
sp\|F6GXK2_VITVI	46	437	466	84.12

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3899.1	24	442	442	51.8	419	50	1e-116
Target_name	Start	End	Length	Cov(%)
AT4G26000.1	41	495	495	91.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold114	Augustus	mRNA	232478	237116	.	-	.	ID=Dca3899.1;Parent=Dca3899
scaffold114	Augustus	exon	232478	232663	.	-	.	ID=Dca3899.1.exon1;Parent=Dca3899.1
scaffold114	Augustus	exon	232765	232959	.	-	.	ID=Dca3899.1.exon2;Parent=Dca3899.1
scaffold114	Augustus	exon	233184	233444	.	-	.	ID=Dca3899.1.exon3;Parent=Dca3899.1
scaffold114	Augustus	exon	233545	233693	.	-	.	ID=Dca3899.1.exon4;Parent=Dca3899.1
scaffold114	Augustus	exon	234496	234748	.	-	.	ID=Dca3899.1.exon5;Parent=Dca3899.1
scaffold114	Augustus	exon	236832	237116	.	-	.	ID=Dca3899.1.exon6;Parent=Dca3899.1