Carnation DB

Dca39003.1

Annotation

7-exons
f-1
sp|E0CSF1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0014g02090#GO:0003676#1F0P0C
AT3G15140.1 | Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr3:5099712-5101717 REVERSE LENGTH=337
Repeat List (scaffold42)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39003.1	46	330	380	48.94	285	66	3e-108
Target_name	Start	End	Length	Cov(%)
sp\|E0CSF1_VITVI	2	256	256	99.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39003.1	21	330	380	46.31	310	57	6e-102
Target_name	Start	End	Length	Cov(%)
AT3G15140.1	67	337	337	80.41

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold42	Augustus	mRNA	401615	404449	.	-	.	ID=Dca39003.1;Parent=Dca39003
scaffold42	Augustus	exon	401615	401965	.	-	.	ID=Dca39003.1.exon1;Parent=Dca39003.1
scaffold42	Augustus	exon	402294	402417	.	-	.	ID=Dca39003.1.exon2;Parent=Dca39003.1
scaffold42	Augustus	exon	402576	402701	.	-	.	ID=Dca39003.1.exon3;Parent=Dca39003.1
scaffold42	Augustus	exon	402935	403015	.	-	.	ID=Dca39003.1.exon4;Parent=Dca39003.1
scaffold42	Augustus	exon	403178	403380	.	-	.	ID=Dca39003.1.exon5;Parent=Dca39003.1
scaffold42	Augustus	exon	403537	403621	.	-	.	ID=Dca39003.1.exon6;Parent=Dca39003.1
scaffold42	Augustus	exon	404277	404449	.	-	.	ID=Dca39003.1.exon7;Parent=Dca39003.1