Dca39111.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold4215)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39111.1 |
354 |
497 |
498 |
17.46 |
144 |
61 |
7e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
807 |
950 |
964 |
14.93 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39111.1 |
354 |
496 |
498 |
10.44 |
143 |
37 |
2e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1269 |
1409 |
1428 |
9.87 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4215 |
Augustus |
mRNA |
30278 |
33222 |
. |
+ |
. |
ID=Dca39111.1;Parent=Dca39111 |
| scaffold4215 |
Augustus |
exon |
30278 |
31339 |
. |
+ |
. |
ID=Dca39111.1.exon1;Parent=Dca39111.1 |
| scaffold4215 |
Augustus |
exon |
32788 |
33222 |
. |
+ |
. |
ID=Dca39111.1.exon2;Parent=Dca39111.1 |
