Carnation DB

Dca39130.1

Annotation

5-exons
f-1
sp|B9N982_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1118307#GO:0016021;GO:0005886;GO:0008643#0F1P2C
AT5G53190.1 | Symbols: SWEET3, AtSWEET3 | Nodulin MtN3 family protein | chr5:21572417-21574284 REVERSE LENGTH=263
Repeat List (scaffold422)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39130.1	1	203	204	61.76	203	52	1e-64
Target_name	Start	End	Length	Cov(%)
sp\|B9N982_POPTR	1	244	250	97.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39130.1	1	196	204	50	196	44	3e-53
Target_name	Start	End	Length	Cov(%)
AT5G53190.1	1	236	263	89.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold422	Augustus	mRNA	88589	90169	.	+	.	ID=Dca39130.1;Parent=Dca39130
scaffold422	Augustus	exon	88589	88625	.	+	.	ID=Dca39130.1.exon1;Parent=Dca39130.1
scaffold422	Augustus	exon	88829	88865	.	+	.	ID=Dca39130.1.exon2;Parent=Dca39130.1
scaffold422	Augustus	exon	89089	89311	.	+	.	ID=Dca39130.1.exon3;Parent=Dca39130.1
scaffold422	Augustus	exon	89392	89553	.	+	.	ID=Dca39130.1.exon4;Parent=Dca39130.1
scaffold422	Augustus	exon	90014	90169	.	+	.	ID=Dca39130.1.exon5;Parent=Dca39130.1