Carnation DB

Dca3917.1

Annotation

9-exons
f-1
sp|F6H088_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g14230#GO:0005524;GO:0006096#1F1P0C
sp|B9R883_RICCO#Hexokinase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1597800#GO:0005524;GO:0004396;GO:0006096#2F1P0C
Repeat List (scaffold11409)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3917.1	32	269	284	60.91	238	57	4e-86
Target_name	Start	End	Length	Cov(%)
sp\|F6H088_VITVI	116	422	485	63.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3917.1	27	268	284	54.22	242	50	4e-73
Target_name	Start	End	Length	Cov(%)
AT1G47840.1	119	429	493	63.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11409	Augustus	mRNA	3488	7434	.	-	.	ID=Dca3917.1;Parent=Dca3917
scaffold11409	Augustus	exon	3488	3543	.	-	.	ID=Dca3917.1.exon1;Parent=Dca3917.1
scaffold11409	Augustus	exon	4094	4220	.	-	.	ID=Dca3917.1.exon2;Parent=Dca3917.1
scaffold11409	Augustus	exon	4472	4553	.	-	.	ID=Dca3917.1.exon3;Parent=Dca3917.1
scaffold11409	Augustus	exon	4659	4789	.	-	.	ID=Dca3917.1.exon4;Parent=Dca3917.1
scaffold11409	Augustus	exon	5008	5163	.	-	.	ID=Dca3917.1.exon5;Parent=Dca3917.1
scaffold11409	Augustus	exon	5294	5364	.	-	.	ID=Dca3917.1.exon6;Parent=Dca3917.1
scaffold11409	Augustus	exon	5595	5670	.	-	.	ID=Dca3917.1.exon7;Parent=Dca3917.1
scaffold11409	Augustus	exon	5760	5858	.	-	.	ID=Dca3917.1.exon8;Parent=Dca3917.1
scaffold11409	Augustus	exon	7378	7434	.	-	.	ID=Dca3917.1.exon9;Parent=Dca3917.1