Carnation DB

Dca39190.1

Annotation

6-exons
f-1
sp|F6I5J4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0171g00050#unknown#0F0P0C
Os01t0601675-01 Leucine-rich repeat, N-terminal domain containing protein.
Repeat List (scaffold423)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39190.1	2	345	1348	11.57	344	45	9e-59
Target_name	Start	End	Length	Cov(%)
sp\|F6I5J4_VITVI	637	975	988	34.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39190.1	2	339	1348	10.53	338	37	2e-48
Target_name	Start	End	Length	Cov(%)
Os01t0601675-01	571	945	954	39.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold423	Augustus	mRNA	48393	55630	.	+	.	ID=Dca39190.1;Parent=Dca39190
scaffold423	Augustus	exon	48393	49403	.	+	.	ID=Dca39190.1.exon1;Parent=Dca39190.1
scaffold423	Augustus	exon	51309	52500	.	+	.	ID=Dca39190.1.exon2;Parent=Dca39190.1
scaffold423	Augustus	exon	52582	53692	.	+	.	ID=Dca39190.1.exon3;Parent=Dca39190.1
scaffold423	Augustus	exon	54625	54776	.	+	.	ID=Dca39190.1.exon4;Parent=Dca39190.1
scaffold423	Augustus	exon	54865	54884	.	+	.	ID=Dca39190.1.exon5;Parent=Dca39190.1
scaffold423	Augustus	exon	55070	55630	.	+	.	ID=Dca39190.1.exon6;Parent=Dca39190.1