Carnation DB

Dca39237.1

Annotation

6-exons
f-1
sp|F6HQW1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g02980#unknown#0F0P0C
Repeat List (scaffold4239)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39237.1	1	219	234	40.59	219	40	1e-28
Target_name	Start	End	Length	Cov(%)
sp\|F6HQW1_VITVI	1	202	231	87.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39237.1	55	215	234	33.33	161	46	1e-24
Target_name	Start	End	Length	Cov(%)
AT5G02770.1	61	195	214	63.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4239	Augustus	mRNA	19690	24765	.	+	.	ID=Dca39237.1;Parent=Dca39237
scaffold4239	Augustus	exon	19690	19991	.	+	.	ID=Dca39237.1.exon1;Parent=Dca39237.1
scaffold4239	Augustus	exon	22347	22433	.	+	.	ID=Dca39237.1.exon2;Parent=Dca39237.1
scaffold4239	Augustus	exon	24093	24164	.	+	.	ID=Dca39237.1.exon3;Parent=Dca39237.1
scaffold4239	Augustus	exon	24272	24415	.	+	.	ID=Dca39237.1.exon4;Parent=Dca39237.1
scaffold4239	Augustus	exon	24574	24634	.	+	.	ID=Dca39237.1.exon5;Parent=Dca39237.1
scaffold4239	Augustus	exon	24727	24765	.	+	.	ID=Dca39237.1.exon6;Parent=Dca39237.1