Carnation DB

Dca39239.1

Annotation

5-exons
f-1
sp|B9SQS7_RICCO#Auxin-responsive protein IAA13, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1217330#GO:0005634;GO:0046983;GO:0009734;GO:0006355;GO:0006351#1F3P1C
Repeat List (scaffold424)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39239.1	120	320	320	36.25	201	53	8e-56
Target_name	Start	End	Length	Cov(%)
sp\|B9SQS7_RICCO	113	318	318	64.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39239.1	123	320	320	33.43	198	52	1e-51
Target_name	Start	End	Length	Cov(%)
AT2G33310.2	53	247	247	78.94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold424	Augus-PASA	mRNA	11580	14216	.	-	.	ID=Dca39239.1;Parent=Dca39239
scaffold424	Augus-PASA	exon	11580	11629	.	-	.	ID=Dca39239.1.exon1;Parent=Dca39239.1
scaffold424	Augus-PASA	exon	11723	11784	.	-	.	ID=Dca39239.1.exon2;Parent=Dca39239.1
scaffold424	Augus-PASA	exon	12717	12852	.	-	.	ID=Dca39239.1.exon3;Parent=Dca39239.1
scaffold424	Augus-PASA	exon	13281	13588	.	-	.	ID=Dca39239.1.exon4;Parent=Dca39239.1
scaffold424	Augus-PASA	exon	13810	14216	.	-	.	ID=Dca39239.1.exon5;Parent=Dca39239.1