Carnation DB

Dca39248.1

Annotation

7-exons
f-1
sp|B9SKP0_RICCO#Transcription factor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0542940#GO:0005634;GO:0003677;GO:0006355#1F1P1C
Repeat List (scaffold424)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39248.1	1	421	490	45.3	421	53	4e-116
Target_name	Start	End	Length	Cov(%)
sp\|B9SKP0_RICCO	1	421	491	85.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39248.1	65	393	490	34.89	329	51	3e-77
Target_name	Start	End	Length	Cov(%)
AT4G28610.1	53	354	409	73.83

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold424	Augus-PASA	mRNA	79161	83327	.	+	.	ID=Dca39248.1;Parent=Dca39248
scaffold424	Augus-PASA	exon	79161	79817	.	+	.	ID=Dca39248.1.exon1;Parent=Dca39248.1
scaffold424	Augus-PASA	exon	79921	80131	.	+	.	ID=Dca39248.1.exon2;Parent=Dca39248.1
scaffold424	Augus-PASA	exon	80214	80290	.	+	.	ID=Dca39248.1.exon3;Parent=Dca39248.1
scaffold424	Augus-PASA	exon	80420	80459	.	+	.	ID=Dca39248.1.exon4;Parent=Dca39248.1
scaffold424	Augus-PASA	exon	81835	81892	.	+	.	ID=Dca39248.1.exon5;Parent=Dca39248.1
scaffold424	Augus-PASA	exon	82738	82807	.	+	.	ID=Dca39248.1.exon6;Parent=Dca39248.1
scaffold424	Augus-PASA	exon	82968	83327	.	+	.	ID=Dca39248.1.exon7;Parent=Dca39248.1