Dca393.1
Annotation
- 4-exons
- f-1
- sp|Q0ZCB7_POPTR#Integrase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold10041)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca393.1 |
114 |
1218 |
1248 |
45.35 |
1105 |
51 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q0ZCB7_POPTR |
100 |
1159 |
1332 |
79.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca393.1 |
589 |
1225 |
1248 |
15.54 |
637 |
30 |
3e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
793 |
1399 |
1539 |
39.44 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10041 |
Augustus |
mRNA |
6692 |
14352 |
. |
+ |
. |
ID=Dca393.1;Parent=Dca393 |
| scaffold10041 |
Augustus |
exon |
6692 |
6852 |
. |
+ |
. |
ID=Dca393.1.exon1;Parent=Dca393.1 |
| scaffold10041 |
Augustus |
exon |
10279 |
11880 |
. |
+ |
. |
ID=Dca393.1.exon2;Parent=Dca393.1 |
| scaffold10041 |
Augustus |
exon |
12227 |
14195 |
. |
+ |
. |
ID=Dca393.1.exon3;Parent=Dca393.1 |
| scaffold10041 |
Augustus |
exon |
14338 |
14352 |
. |
+ |
. |
ID=Dca393.1.exon4;Parent=Dca393.1 |
