Dca39348.1
Annotation
- 2-exons
- f-1
- sp|A5AFE2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041217#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os02t0671800-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold4257)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39348.1 |
46 |
410 |
424 |
38.2 |
365 |
43 |
2e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AFE2_VITVI |
1 |
370 |
1269 |
29.15 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39348.1 |
86 |
409 |
424 |
23.11 |
324 |
30 |
2e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0671800-01 |
3 |
313 |
573 |
54.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4257 |
Augustus |
mRNA |
18224 |
19638 |
. |
- |
. |
ID=Dca39348.1;Parent=Dca39348 |
| scaffold4257 |
Augustus |
exon |
18224 |
18279 |
. |
- |
. |
ID=Dca39348.1.exon1;Parent=Dca39348.1 |
| scaffold4257 |
Augustus |
exon |
18420 |
19638 |
. |
- |
. |
ID=Dca39348.1.exon2;Parent=Dca39348.1 |
