Dca39390.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q7Y1N4_ORYSJ#Putative retrotransposon gag protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0053G10.17#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold4266)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39390.1 |
22 |
404 |
514 |
31.51 |
383 |
32 |
4e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
224 |
727 |
1717 |
29.35 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4266 |
Augustus |
mRNA |
1529 |
3370 |
. |
- |
. |
ID=Dca39390.1;Parent=Dca39390 |
| scaffold4266 |
Augustus |
exon |
1529 |
2112 |
. |
- |
. |
ID=Dca39390.1.exon1;Parent=Dca39390.1 |
| scaffold4266 |
Augustus |
exon |
2320 |
2545 |
. |
- |
. |
ID=Dca39390.1.exon2;Parent=Dca39390.1 |
| scaffold4266 |
Augustus |
exon |
2636 |
3370 |
. |
- |
. |
ID=Dca39390.1.exon3;Parent=Dca39390.1 |
