Dca39400.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4269)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39400.1 |
27 |
710 |
719 |
44.08 |
684 |
44 |
3e-167
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
9 |
734 |
1501 |
48.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39400.1 |
346 |
715 |
719 |
19.61 |
370 |
38 |
9e-66
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
55 |
431 |
707 |
53.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4269 |
Augustus |
mRNA |
48651 |
50894 |
. |
+ |
. |
ID=Dca39400.1;Parent=Dca39400 |
| scaffold4269 |
Augustus |
exon |
48651 |
49518 |
. |
+ |
. |
ID=Dca39400.1.exon1;Parent=Dca39400.1 |
| scaffold4269 |
Augustus |
exon |
49603 |
50894 |
. |
+ |
. |
ID=Dca39400.1.exon2;Parent=Dca39400.1 |
