Dca3942.1
Annotation
- 4-exons
- f-1
- sp|B9MWP0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_592708#GO:0005524;GO:0004674#2F0P0C
- sp|B9RV84_RICCO#ATP binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0900700#GO:0005524;GO:0004674#2F0P0C
- Repeat List (scaffold1142)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3942.1 |
1 |
361 |
370 |
73.51 |
361 |
75 |
1e-157
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MWP0_POPTR |
1 |
364 |
371 |
98.11 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3942.1 |
9 |
328 |
370 |
65.67 |
320 |
75 |
6e-143
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0186500-02 |
6 |
330 |
378 |
85.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1142 |
Augus-PASA |
mRNA |
184488 |
187684 |
. |
+ |
. |
ID=Dca3942.1;Parent=Dca3942 |
| scaffold1142 |
Augus-PASA |
exon |
184488 |
184531 |
. |
+ |
. |
ID=Dca3942.1.exon1;Parent=Dca3942.1 |
| scaffold1142 |
Augus-PASA |
exon |
185887 |
186034 |
. |
+ |
. |
ID=Dca3942.1.exon2;Parent=Dca3942.1 |
| scaffold1142 |
Augus-PASA |
exon |
186482 |
186744 |
. |
+ |
. |
ID=Dca3942.1.exon3;Parent=Dca3942.1 |
| scaffold1142 |
Augus-PASA |
exon |
187027 |
187684 |
. |
+ |
. |
ID=Dca3942.1.exon4;Parent=Dca3942.1 |
