Dca39428.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold427)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39428.1 |
49 |
345 |
467 |
21.19 |
297 |
33 |
5e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
33 |
301 |
1501 |
17.92 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39428.1 |
352 |
430 |
467 |
8.56 |
79 |
50 |
2e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G55130.1 |
322 |
401 |
464 |
17.24 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold427 |
Augustus |
mRNA |
259516 |
261913 |
. |
- |
. |
ID=Dca39428.1;Parent=Dca39428 |
| scaffold427 |
Augustus |
exon |
259516 |
259833 |
. |
- |
. |
ID=Dca39428.1.exon1;Parent=Dca39428.1 |
| scaffold427 |
Augustus |
exon |
260828 |
261913 |
. |
- |
. |
ID=Dca39428.1.exon2;Parent=Dca39428.1 |
