Dca3949.1
Annotation
- 4-exons
- f-1
- sp|F6H004_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g10680#unknown#0F0P0C
- Os11t0615000-01 LNS2, Lipin/Ned1/Smp2 domain containing protein.
- Repeat List (scaffold1143)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3949.1 |
41 |
97 |
109 |
44.95 |
57 |
86 |
6e-24
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6H004_VITVI |
859 |
915 |
1024 |
5.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3949.1 |
42 |
97 |
109 |
44.03 |
56 |
86 |
2e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0615000-01 |
50 |
105 |
216 |
25.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1143 |
Augustus |
mRNA |
7841 |
10886 |
. |
- |
. |
ID=Dca3949.1;Parent=Dca3949 |
| scaffold1143 |
Augustus |
exon |
7841 |
7951 |
. |
- |
. |
ID=Dca3949.1.exon1;Parent=Dca3949.1 |
| scaffold1143 |
Augustus |
exon |
8040 |
8126 |
. |
- |
. |
ID=Dca3949.1.exon2;Parent=Dca3949.1 |
| scaffold1143 |
Augustus |
exon |
8607 |
8645 |
. |
- |
. |
ID=Dca3949.1.exon3;Parent=Dca3949.1 |
| scaffold1143 |
Augustus |
exon |
10794 |
10886 |
. |
- |
. |
ID=Dca3949.1.exon4;Parent=Dca3949.1 |
