Carnation DB

Dca39501.1

Annotation

5-exons
f-1
sp|B9HYI5_POPTR#Amino acid transporter#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_833742#GO:0016021#0F0P1C
Repeat List (scaffold4286)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39501.1	5	432	436	65.82	428	67	4e-160
Target_name	Start	End	Length	Cov(%)
sp\|B9HYI5_POPTR	7	430	435	97.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39501.1	1	432	436	55.27	432	56	1e-132
Target_name	Start	End	Length	Cov(%)
AT3G56200.1	1	431	435	99.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4286	Augustus	mRNA	8017	10854	.	+	.	ID=Dca39501.1;Parent=Dca39501
scaffold4286	Augustus	exon	8017	8392	.	+	.	ID=Dca39501.1.exon1;Parent=Dca39501.1
scaffold4286	Augustus	exon	9541	9693	.	+	.	ID=Dca39501.1.exon2;Parent=Dca39501.1
scaffold4286	Augustus	exon	9782	9985	.	+	.	ID=Dca39501.1.exon3;Parent=Dca39501.1
scaffold4286	Augustus	exon	10066	10522	.	+	.	ID=Dca39501.1.exon4;Parent=Dca39501.1
scaffold4286	Augus-PASA	exon	10734	10854	.	+	.	ID=Dca39501.1.exon5;Parent=Dca39501.1