Dca39512.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold42893)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39512.1 |
1 |
170 |
182 |
47.8 |
170 |
51 |
3e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
948 |
1119 |
1501 |
11.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39512.1 |
111 |
170 |
182 |
21.42 |
60 |
65 |
8e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0375700-01 |
2 |
61 |
73 |
82.19 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold42893 |
Augustus |
mRNA |
1 |
643 |
. |
+ |
. |
ID=Dca39512.1;Parent=Dca39512 |
| scaffold42893 |
Augustus |
exon |
1 |
507 |
. |
+ |
. |
ID=Dca39512.1.exon1;Parent=Dca39512.1 |
| scaffold42893 |
Augustus |
exon |
602 |
643 |
. |
+ |
. |
ID=Dca39512.1.exon2;Parent=Dca39512.1 |
