Carnation DB

Dca39520.1

Annotation

6-exons
f-1
sp|F6HEV4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g04090#unknown#0F0P0C
sp|B9SJW6_RICCO#Catalytic, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0576870#unknown#0F0P0C
Repeat List (scaffold429)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39520.1	1	234	234	81.62	234	82	3e-112
Target_name	Start	End	Length	Cov(%)
sp\|F6HEV4_VITVI	259	492	494	47.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39520.1	1	234	234	75.64	234	76	9e-106
Target_name	Start	End	Length	Cov(%)
AT1G15060.1	343	576	578	40.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold429	Augustus	mRNA	73767	76520	.	+	.	ID=Dca39520.1;Parent=Dca39520
scaffold429	Augustus	exon	73767	73869	.	+	.	ID=Dca39520.1.exon1;Parent=Dca39520.1
scaffold429	Augustus	exon	74803	74903	.	+	.	ID=Dca39520.1.exon2;Parent=Dca39520.1
scaffold429	Augustus	exon	75018	75192	.	+	.	ID=Dca39520.1.exon3;Parent=Dca39520.1
scaffold429	Augus-PASA	exon	75730	75900	.	+	.	ID=Dca39520.1.exon4;Parent=Dca39520.1
scaffold429	Augus-PASA	exon	76286	76386	.	+	.	ID=Dca39520.1.exon5;Parent=Dca39520.1
scaffold429	Augus-PASA	exon	76467	76520	.	+	.	ID=Dca39520.1.exon6;Parent=Dca39520.1