Dca39541.1
Annotation
- 3-exons
- f-1
- sp|Q2QP23_ORYSJ#Transposon protein, putative, CACTA, En/Spm sub-class, expressed#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g35940#unknown#0F0P0C
- Repeat List (scaffold4291)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39541.1 |
4 |
1038 |
1038 |
55.49 |
1035 |
56 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QP23_ORYSJ |
71 |
1109 |
1114 |
93.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39541.1 |
4 |
720 |
1038 |
30.05 |
717 |
42 |
1e-173
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0208400-02 |
67 |
794 |
829 |
87.81 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4291 |
Augustus |
mRNA |
33894 |
37177 |
. |
- |
. |
ID=Dca39541.1;Parent=Dca39541 |
| scaffold4291 |
Augustus |
exon |
33894 |
34556 |
. |
- |
. |
ID=Dca39541.1.exon1;Parent=Dca39541.1 |
| scaffold4291 |
Augustus |
exon |
34653 |
34758 |
. |
- |
. |
ID=Dca39541.1.exon2;Parent=Dca39541.1 |
| scaffold4291 |
Augustus |
exon |
34830 |
37177 |
. |
- |
. |
ID=Dca39541.1.exon3;Parent=Dca39541.1 |
