Dca3957.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1143)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3957.1 |
4 |
1286 |
1457 |
49.89 |
1283 |
55 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
7 |
1322 |
1501 |
87.67 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3957.1 |
328 |
1258 |
1457 |
24.09 |
931 |
38 |
5e-171
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
414 |
1287 |
1539 |
56.79 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1143 |
Augustus |
mRNA |
68134 |
76737 |
. |
+ |
. |
ID=Dca3957.1;Parent=Dca3957 |
| scaffold1143 |
Augustus |
exon |
68134 |
71991 |
. |
+ |
. |
ID=Dca3957.1.exon1;Parent=Dca3957.1 |
| scaffold1143 |
Augustus |
exon |
76222 |
76737 |
. |
+ |
. |
ID=Dca3957.1.exon2;Parent=Dca3957.1 |
