Dca39577.1
Annotation
- 2-exons
- f-1
- sp|Q850U9_ORYSJ#Putative gag-pol polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0037J17.27#GO:0003676#1F0P0C
- Repeat List (scaffold4299)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39577.1 |
1 |
164 |
168 |
54.16 |
164 |
49 |
2e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q850U9_ORYSJ |
358 |
545 |
547 |
34.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39577.1 |
52 |
153 |
168 |
22.61 |
102 |
38 |
3e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1285 |
1384 |
1401 |
7.13 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4299 |
Augustus |
mRNA |
5687 |
6443 |
. |
- |
. |
ID=Dca39577.1;Parent=Dca39577 |
| scaffold4299 |
Augustus |
exon |
5687 |
6045 |
. |
- |
. |
ID=Dca39577.1.exon1;Parent=Dca39577.1 |
| scaffold4299 |
Augustus |
exon |
6296 |
6443 |
. |
- |
. |
ID=Dca39577.1.exon2;Parent=Dca39577.1 |
