Dca3970.1
Annotation
- 3-exons
- f-1
- sp|B9HBQ5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1081174#GO:0004190;GO:0006508#1F1P0C
- AT3G52500.1 | Symbols: | Eukaryotic aspartyl protease family protein | chr3:19465644-19467053 REVERSE LENGTH=469
- Repeat List (scaffold1144)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3970.1 |
758 |
1016 |
1104 |
10.86 |
259 |
45 |
6e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HBQ5_POPTR |
190 |
452 |
469 |
56.07 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3970.1 |
766 |
1035 |
1104 |
9.87 |
270 |
39 |
6e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G52500.1 |
194 |
469 |
469 |
58.84 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1144 |
Augustus |
mRNA |
5272 |
13134 |
. |
- |
. |
ID=Dca3970.1;Parent=Dca3970 |
| scaffold1144 |
Augustus |
exon |
5272 |
5570 |
. |
- |
. |
ID=Dca3970.1.exon1;Parent=Dca3970.1 |
| scaffold1144 |
Augustus |
exon |
8829 |
10529 |
. |
- |
. |
ID=Dca3970.1.exon2;Parent=Dca3970.1 |
| scaffold1144 |
Augustus |
exon |
11820 |
13134 |
. |
- |
. |
ID=Dca3970.1.exon3;Parent=Dca3970.1 |
