Dca39768.1
Annotation
- 2-exons
- f-1
- sp|Q6L3S2_SOLDE#Putative retrotransposon protein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_41t00017#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold43172)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39768.1 |
2 |
67 |
98 |
38.77 |
66 |
58 |
3e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3S2_SOLDE |
1536 |
1601 |
1602 |
4.11 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39768.1 |
2 |
61 |
98 |
21.42 |
60 |
35 |
2e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
167 |
226 |
230 |
26.08 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold43172 |
Augustus |
mRNA |
1 |
566 |
. |
+ |
. |
ID=Dca39768.1;Parent=Dca39768 |
| scaffold43172 |
Augustus |
exon |
1 |
190 |
. |
+ |
. |
ID=Dca39768.1.exon1;Parent=Dca39768.1 |
| scaffold43172 |
Augustus |
exon |
460 |
566 |
. |
+ |
. |
ID=Dca39768.1.exon2;Parent=Dca39768.1 |
