Carnation DB

Dca3979.1

Annotation

8-exons
f-1
sp|B9HBY1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_416267#GO:0031072;GO:0051082#2F0P0C
AT5G06130.2 | Symbols: | chaperone protein dnaJ-related | chr5:1853754-1855763 REVERSE LENGTH=315
Repeat List (scaffold1144)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3979.1	83	329	329	59.57	247	80	5e-116
Target_name	Start	End	Length	Cov(%)
sp\|B9HBY1_POPTR	2	248	248	99.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3979.1	82	329	329	56.23	248	75	1e-106
Target_name	Start	End	Length	Cov(%)
AT5G06130.2	68	315	315	78.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1144	Augustus	mRNA	74361	79629	.	+	.	ID=Dca3979.1;Parent=Dca3979
scaffold1144	Augustus	exon	74361	74590	.	+	.	ID=Dca3979.1.exon1;Parent=Dca3979.1
scaffold1144	Augustus	exon	75152	75284	.	+	.	ID=Dca3979.1.exon2;Parent=Dca3979.1
scaffold1144	Augustus	exon	75366	75485	.	+	.	ID=Dca3979.1.exon3;Parent=Dca3979.1
scaffold1144	Augustus	exon	75935	76021	.	+	.	ID=Dca3979.1.exon4;Parent=Dca3979.1
scaffold1144	Augustus	exon	77359	77435	.	+	.	ID=Dca3979.1.exon5;Parent=Dca3979.1
scaffold1144	Augustus	exon	77700	77827	.	+	.	ID=Dca3979.1.exon6;Parent=Dca3979.1
scaffold1144	Augustus	exon	78681	78817	.	+	.	ID=Dca3979.1.exon7;Parent=Dca3979.1
scaffold1144	Augustus	exon	79552	79629	.	+	.	ID=Dca3979.1.exon8;Parent=Dca3979.1