Carnation DB

Dca3983.1

Annotation

9-exons
f-1
sp|C6TJP0_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0005622;GO:0004221;GO:0006511#1F1P1C
AT4G17510.1 | Symbols: UCH3 | ubiquitin C-terminal hydrolase 3 | chr4:9767114-9768648 REVERSE LENGTH=234
Repeat List (scaffold11448)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3983.1	6	229	229	75.54	224	78	7e-105
Target_name	Start	End	Length	Cov(%)
sp\|C6TJP0_SOYBN	9	232	236	94.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3983.1	2	228	229	71.61	227	72	5e-98
Target_name	Start	End	Length	Cov(%)
AT4G17510.1	5	233	234	97.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11448	Augustus	mRNA	5292	9059	.	+	.	ID=Dca3983.1;Parent=Dca3983
scaffold11448	Augustus	exon	5292	5357	.	+	.	ID=Dca3983.1.exon1;Parent=Dca3983.1
scaffold11448	Augustus	exon	5747	5878	.	+	.	ID=Dca3983.1.exon2;Parent=Dca3983.1
scaffold11448	Augustus	exon	6156	6194	.	+	.	ID=Dca3983.1.exon3;Parent=Dca3983.1
scaffold11448	Augustus	exon	7231	7336	.	+	.	ID=Dca3983.1.exon4;Parent=Dca3983.1
scaffold11448	Augustus	exon	7524	7582	.	+	.	ID=Dca3983.1.exon5;Parent=Dca3983.1
scaffold11448	Augustus	exon	7665	7739	.	+	.	ID=Dca3983.1.exon6;Parent=Dca3983.1
scaffold11448	Augustus	exon	8035	8083	.	+	.	ID=Dca3983.1.exon7;Parent=Dca3983.1
scaffold11448	Augustus	exon	8179	8255	.	+	.	ID=Dca3983.1.exon8;Parent=Dca3983.1
scaffold11448	Augustus	exon	8973	9059	.	+	.	ID=Dca3983.1.exon9;Parent=Dca3983.1