Carnation DB

Dca39835.1

Annotation

20-exons
f-1
sp|D7MGP9_ARALL#Predicted protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_657631#GO:0005622;GO:0005096;GO:0007165#1F1P1C
AT4G24580.1 | Symbols: REN1 | Rho GTPase activation protein (RhoGAP) with PH domain | chr4:12687879-12694248 REVERSE LENGTH=933
Repeat List (scaffold433)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39835.1	31	776	1086	37.29	746	51	5e-167
Target_name	Start	End	Length	Cov(%)
sp\|D7MGP9_ARALL	100	855	925	81.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39835.1	31	785	1086	37.2	755	49	7e-166
Target_name	Start	End	Length	Cov(%)
AT4G24580.1	99	873	933	83.06

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold433	Augustus	mRNA	21645	31016	.	+	.	ID=Dca39835.1;Parent=Dca39835
scaffold433	Augustus	exon	21645	21650	.	+	.	ID=Dca39835.1.exon1;Parent=Dca39835.1
scaffold433	Augustus	exon	22684	22767	.	+	.	ID=Dca39835.1.exon2;Parent=Dca39835.1
scaffold433	Augustus	exon	23772	23842	.	+	.	ID=Dca39835.1.exon3;Parent=Dca39835.1
scaffold433	Augustus	exon	24103	24181	.	+	.	ID=Dca39835.1.exon4;Parent=Dca39835.1
scaffold433	Augustus	exon	24808	24940	.	+	.	ID=Dca39835.1.exon5;Parent=Dca39835.1
scaffold433	Augustus	exon	25744	25821	.	+	.	ID=Dca39835.1.exon6;Parent=Dca39835.1
scaffold433	Augustus	exon	25914	25969	.	+	.	ID=Dca39835.1.exon7;Parent=Dca39835.1
scaffold433	Augustus	exon	26071	26140	.	+	.	ID=Dca39835.1.exon8;Parent=Dca39835.1
scaffold433	Augustus	exon	26400	26484	.	+	.	ID=Dca39835.1.exon9;Parent=Dca39835.1
scaffold433	Augustus	exon	26612	26858	.	+	.	ID=Dca39835.1.exon10;Parent=Dca39835.1
scaffold433	Augustus	exon	27032	27248	.	+	.	ID=Dca39835.1.exon11;Parent=Dca39835.1
scaffold433	Augustus	exon	27577	27920	.	+	.	ID=Dca39835.1.exon12;Parent=Dca39835.1
scaffold433	Augustus	exon	28013	28062	.	+	.	ID=Dca39835.1.exon13;Parent=Dca39835.1
scaffold433	Augustus	exon	28502	28565	.	+	.	ID=Dca39835.1.exon14;Parent=Dca39835.1
scaffold433	Augustus	exon	28641	28724	.	+	.	ID=Dca39835.1.exon15;Parent=Dca39835.1
scaffold433	Augustus	exon	28830	28937	.	+	.	ID=Dca39835.1.exon16;Parent=Dca39835.1
scaffold433	Augustus	exon	29029	29198	.	+	.	ID=Dca39835.1.exon17;Parent=Dca39835.1
scaffold433	Augustus	exon	29327	29393	.	+	.	ID=Dca39835.1.exon18;Parent=Dca39835.1
scaffold433	Augustus	exon	29585	30320	.	+	.	ID=Dca39835.1.exon19;Parent=Dca39835.1
scaffold433	Augustus	exon	30505	31016	.	+	.	ID=Dca39835.1.exon20;Parent=Dca39835.1