Carnation DB

Dca39893.1

Annotation

5-exons
f-1
sp|B9RE13_RICCO#Thylakoid membrane phosphoprotein 14 kDa, chloroplast, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1617300#unknown#0F0P0C
Repeat List (scaffold434)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39893.1	22	161	161	62.11	140	70	1e-50
Target_name	Start	End	Length	Cov(%)
sp\|B9RE13_RICCO	25	167	167	85.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39893.1	1	161	161	65.21	161	63	8e-50
Target_name	Start	End	Length	Cov(%)
AT4G01150.1	3	164	164	98.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold434	Augus-PASA	mRNA	96681	98407	.	-	.	ID=Dca39893.1;Parent=Dca39893
scaffold434	Augus-PASA	exon	96681	96746	.	-	.	ID=Dca39893.1.exon1;Parent=Dca39893.1
scaffold434	Augus-PASA	exon	96855	96926	.	-	.	ID=Dca39893.1.exon2;Parent=Dca39893.1
scaffold434	Augus-PASA	exon	97188	97295	.	-	.	ID=Dca39893.1.exon3;Parent=Dca39893.1
scaffold434	Augus-PASA	exon	97376	97473	.	-	.	ID=Dca39893.1.exon4;Parent=Dca39893.1
scaffold434	Augus-PASA	exon	98266	98407	.	-	.	ID=Dca39893.1.exon5;Parent=Dca39893.1