Carnation DB

Dca39907.1

Annotation

9-exons
f-1
sp|D7TKV5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0056g00070#GO:0004488;GO:0000166;GO:0009396#2F1P0C
Os09t0327300-01 Similar to Plastid 5,10-methylene-tetrahydrofolate dehydrogenase (Fragment).
Repeat List (scaffold4343)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39907.1	336	630	631	29.31	295	63	2e-110
Target_name	Start	End	Length	Cov(%)
sp\|D7TKV5_VITVI	63	357	358	82.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39907.1	318	630	631	29.47	313	59	3e-106
Target_name	Start	End	Length	Cov(%)
Os09t0327300-01	70	388	396	80.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4343	Augustus	mRNA	5743	11082	.	-	.	ID=Dca39907.1;Parent=Dca39907
scaffold4343	Augustus	exon	5743	5913	.	-	.	ID=Dca39907.1.exon1;Parent=Dca39907.1
scaffold4343	Augustus	exon	6031	6198	.	-	.	ID=Dca39907.1.exon2;Parent=Dca39907.1
scaffold4343	Augustus	exon	6303	6539	.	-	.	ID=Dca39907.1.exon3;Parent=Dca39907.1
scaffold4343	Augustus	exon	6866	7188	.	-	.	ID=Dca39907.1.exon4;Parent=Dca39907.1
scaffold4343	Augustus	exon	8052	8220	.	-	.	ID=Dca39907.1.exon5;Parent=Dca39907.1
scaffold4343	Augustus	exon	8351	8518	.	-	.	ID=Dca39907.1.exon6;Parent=Dca39907.1
scaffold4343	Augustus	exon	8611	8847	.	-	.	ID=Dca39907.1.exon7;Parent=Dca39907.1
scaffold4343	Augustus	exon	9173	9492	.	-	.	ID=Dca39907.1.exon8;Parent=Dca39907.1
scaffold4343	Augustus	exon	10980	11082	.	-	.	ID=Dca39907.1.exon9;Parent=Dca39907.1