Carnation DB

Dca39934.1

Annotation

6-exons
f-1
sp|B9RKW9_RICCO#Clathrin coat assembly protein ap19, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1563770#GO:0030117;GO:0008565;GO:0006886;GO:0016192#1F2P1C
Repeat List (scaffold4348)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39934.1	1	160	160	88.75	160	89	2e-81
Target_name	Start	End	Length	Cov(%)
sp\|B9RKW9_RICCO	2	161	161	99.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39934.1	1	160	160	88.12	160	89	2e-81
Target_name	Start	End	Length	Cov(%)
Os03t0783700-00	2	161	162	98.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4348	Augustus	mRNA	11919	12849	.	+	.	ID=Dca39934.1;Parent=Dca39934
scaffold4348	Augustus	exon	11919	12005	.	+	.	ID=Dca39934.1.exon1;Parent=Dca39934.1
scaffold4348	Augus-PASA	exon	12090	12181	.	+	.	ID=Dca39934.1.exon2;Parent=Dca39934.1
scaffold4348	Augus-PASA	exon	12279	12387	.	+	.	ID=Dca39934.1.exon3;Parent=Dca39934.1
scaffold4348	Augus-PASA	exon	12481	12516	.	+	.	ID=Dca39934.1.exon4;Parent=Dca39934.1
scaffold4348	Augus-PASA	exon	12610	12696	.	+	.	ID=Dca39934.1.exon5;Parent=Dca39934.1
scaffold4348	Augus-PASA	exon	12778	12849	.	+	.	ID=Dca39934.1.exon6;Parent=Dca39934.1