Carnation DB

Dca39951.1

Annotation

5-exons
f-1
sp|F6HGW8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g02650#GO:0003735;GO:0006412#1F1P0C
sp|B9S6A5_RICCO#60S ribosomal protein L31, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0534300#GO:0005840;GO:0003735;GO:0006412#1F1P1C
Repeat List (scaffold435)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39951.1	861	1016	1016	11.51	156	75	1e-62
Target_name	Start	End	Length	Cov(%)
sp\|F6HGW8_VITVI	3	152	152	98.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39951.1	898	1016	1016	9.94	119	85	3e-56
Target_name	Start	End	Length	Cov(%)
AT2G19740.1	1	119	119	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold435	Augus-PASA	mRNA	98139	104881	.	+	.	ID=Dca39951.1;Parent=Dca39951
scaffold435	Augus-PASA	exon	98139	98183	.	+	.	ID=Dca39951.1.exon1;Parent=Dca39951.1
scaffold435	Augustus	exon	98789	101280	.	+	.	ID=Dca39951.1.exon2;Parent=Dca39951.1
scaffold435	Augustus	exon	102043	102182	.	+	.	ID=Dca39951.1.exon3;Parent=Dca39951.1
scaffold435	Augustus	exon	103222	103315	.	+	.	ID=Dca39951.1.exon4;Parent=Dca39951.1
scaffold435	Augustus	exon	104602	104881	.	+	.	ID=Dca39951.1.exon5;Parent=Dca39951.1