Dca39960.1
Annotation
- 3-exons
- f-1
- sp|Q2AA09_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=20.t00008#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold4351)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39960.1 |
2 |
161 |
240 |
27.08 |
160 |
40 |
2e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA09_ASPOF |
57 |
203 |
275 |
53.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4351 |
Augustus |
mRNA |
12961 |
20121 |
. |
- |
. |
ID=Dca39960.1;Parent=Dca39960 |
| scaffold4351 |
Augustus |
exon |
12961 |
13149 |
. |
- |
. |
ID=Dca39960.1.exon1;Parent=Dca39960.1 |
| scaffold4351 |
Augustus |
exon |
13229 |
13278 |
. |
- |
. |
ID=Dca39960.1.exon2;Parent=Dca39960.1 |
| scaffold4351 |
Augustus |
exon |
19638 |
20121 |
. |
- |
. |
ID=Dca39960.1.exon3;Parent=Dca39960.1 |
