Dca39981.1
Annotation
- 4-exons
- f-1
- sp|Q9ZVF0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g01550#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold4358)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39981.1 |
14 |
521 |
923 |
19.71 |
508 |
33 |
2e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZVF0_ARATH |
860 |
1400 |
1449 |
37.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39981.1 |
177 |
535 |
923 |
13.54 |
359 |
30 |
5e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G24255.1 |
1 |
412 |
746 |
55.22 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4358 |
Augustus |
mRNA |
576 |
8236 |
. |
+ |
. |
ID=Dca39981.1;Parent=Dca39981 |
| scaffold4358 |
Augustus |
exon |
576 |
1060 |
. |
+ |
. |
ID=Dca39981.1.exon1;Parent=Dca39981.1 |
| scaffold4358 |
Augustus |
exon |
1472 |
2616 |
. |
+ |
. |
ID=Dca39981.1.exon2;Parent=Dca39981.1 |
| scaffold4358 |
Augustus |
exon |
7003 |
7114 |
. |
+ |
. |
ID=Dca39981.1.exon3;Parent=Dca39981.1 |
| scaffold4358 |
Augustus |
exon |
7207 |
8236 |
. |
+ |
. |
ID=Dca39981.1.exon4;Parent=Dca39981.1 |
