Dca3999.1
Annotation
- 3-exons
- f-1
- sp|D7KWH1_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_895842#GO:0016021;GO:0022857#1F0P1C
- AT1G79360.1 | Symbols: ATOCT2, OCT2, 2-Oct | organic cation/carnitine transporter 2 | chr1:29854140-29855723 REVERSE LENGTH=527
- Repeat List (scaffold1146)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3999.1 |
8 |
342 |
342 |
48.53 |
335 |
48 |
1e-88
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7KWH1_ARALL |
12 |
354 |
526 |
65.2 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3999.1 |
8 |
342 |
342 |
48.24 |
335 |
48 |
2e-87
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G79360.1 |
12 |
355 |
527 |
65.27 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1146 |
Augustus |
mRNA |
74548 |
76205 |
. |
- |
. |
ID=Dca3999.1;Parent=Dca3999 |
| scaffold1146 |
Augustus |
exon |
74548 |
75501 |
. |
- |
. |
ID=Dca3999.1.exon1;Parent=Dca3999.1 |
| scaffold1146 |
Augustus |
exon |
75726 |
75769 |
. |
- |
. |
ID=Dca3999.1.exon2;Parent=Dca3999.1 |
| scaffold1146 |
Augustus |
exon |
76175 |
76205 |
. |
- |
. |
ID=Dca3999.1.exon3;Parent=Dca3999.1 |
