Dca40014.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2QTV1_ORYSJ#Transposable element protein, putative, Retrotrans_gag#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g18420#GO:0003676;GO:0008270#2F0P0C
- Repeat List (scaffold4360)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40014.1 |
7 |
262 |
768 |
13.41 |
256 |
41 |
1e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
12 |
262 |
1717 |
14.61 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40014.1 |
398 |
464 |
768 |
3.38 |
67 |
39 |
7e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
163 |
192 |
34.37 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4360 |
Augustus |
mRNA |
2185 |
4740 |
. |
- |
. |
ID=Dca40014.1;Parent=Dca40014 |
| scaffold4360 |
Augustus |
exon |
2185 |
3660 |
. |
- |
. |
ID=Dca40014.1.exon1;Parent=Dca40014.1 |
| scaffold4360 |
Augustus |
exon |
3910 |
4740 |
. |
- |
. |
ID=Dca40014.1.exon2;Parent=Dca40014.1 |
