Dca40041.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4366)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40041.1 |
1 |
505 |
675 |
41.18 |
505 |
55 |
7e-133
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
236 |
701 |
1717 |
27.14 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40041.1 |
306 |
398 |
675 |
5.18 |
93 |
38 |
2e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4366 |
Augustus |
mRNA |
14743 |
19359 |
. |
+ |
. |
ID=Dca40041.1;Parent=Dca40041 |
| scaffold4366 |
Augustus |
exon |
14743 |
16258 |
. |
+ |
. |
ID=Dca40041.1.exon1;Parent=Dca40041.1 |
| scaffold4366 |
Augustus |
exon |
16420 |
16600 |
. |
+ |
. |
ID=Dca40041.1.exon2;Parent=Dca40041.1 |
| scaffold4366 |
Augustus |
exon |
18656 |
18811 |
. |
+ |
. |
ID=Dca40041.1.exon3;Parent=Dca40041.1 |
| scaffold4366 |
Augustus |
exon |
19185 |
19359 |
. |
+ |
. |
ID=Dca40041.1.exon4;Parent=Dca40041.1 |
