Dca40125.1
Annotation
- 4-exons
- f-1
- sp|D7LZ52_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_487429#unknown#0F0P0C
- AT5G06220.2 | Symbols: | LETM1-like protein | chr5:1880049-1885366 FORWARD LENGTH=909
- Repeat List (scaffold4380)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40125.1 |
45 |
119 |
124 |
41.93 |
75 |
70 |
4e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7LZ52_ARALL |
704 |
778 |
822 |
9.12 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40125.1 |
47 |
119 |
124 |
41.12 |
73 |
70 |
1e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G06220.2 |
793 |
865 |
909 |
8.03 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4380 |
Augustus |
mRNA |
834 |
3286 |
. |
+ |
. |
ID=Dca40125.1;Parent=Dca40125 |
| scaffold4380 |
Augustus |
exon |
834 |
966 |
. |
+ |
. |
ID=Dca40125.1.exon1;Parent=Dca40125.1 |
| scaffold4380 |
Augustus |
exon |
2502 |
2512 |
. |
+ |
. |
ID=Dca40125.1.exon2;Parent=Dca40125.1 |
| scaffold4380 |
Augustus |
exon |
2837 |
3007 |
. |
+ |
. |
ID=Dca40125.1.exon3;Parent=Dca40125.1 |
| scaffold4380 |
Augustus |
exon |
3227 |
3286 |
. |
+ |
. |
ID=Dca40125.1.exon4;Parent=Dca40125.1 |
