Dca40150.1
Annotation
- 3-exons
- f-1
- sp|Q0ZCB7_POPTR#Integrase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold4386)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40150.1 |
1 |
404 |
434 |
53.45 |
404 |
48 |
6e-131
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q0ZCB7_POPTR |
686 |
1167 |
1332 |
36.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40150.1 |
161 |
222 |
434 |
8.75 |
62 |
62 |
9e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00750.1 |
29 |
90 |
119 |
52.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4386 |
Augustus |
mRNA |
23959 |
25505 |
. |
- |
. |
ID=Dca40150.1;Parent=Dca40150 |
| scaffold4386 |
Augustus |
exon |
23959 |
24332 |
. |
- |
. |
ID=Dca40150.1.exon1;Parent=Dca40150.1 |
| scaffold4386 |
Augustus |
exon |
24440 |
24602 |
. |
- |
. |
ID=Dca40150.1.exon2;Parent=Dca40150.1 |
| scaffold4386 |
Augustus |
exon |
24738 |
25505 |
. |
- |
. |
ID=Dca40150.1.exon3;Parent=Dca40150.1 |
