Dca40151.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold4387)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40151.1 |
329 |
480 |
481 |
18.71 |
152 |
60 |
3e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
811 |
962 |
964 |
15.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40151.1 |
329 |
469 |
481 |
11.64 |
141 |
40 |
1e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1246 |
1384 |
1401 |
9.92 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4387 |
Augustus |
mRNA |
8594 |
11616 |
. |
- |
. |
ID=Dca40151.1;Parent=Dca40151 |
| scaffold4387 |
Augustus |
exon |
8594 |
9054 |
. |
- |
. |
ID=Dca40151.1.exon1;Parent=Dca40151.1 |
| scaffold4387 |
Augustus |
exon |
10632 |
11616 |
. |
- |
. |
ID=Dca40151.1.exon2;Parent=Dca40151.1 |
