Carnation DB

Dca40212.1

Annotation

44-exons
f-610
sp|F6HCC0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0067g01130#GO:0016021;GO:0016192#0F1P1C
AT5G05570.1 | Symbols: | transducin family protein / WD-40 repeat family protein | chr5:1656766-1663728 FORWARD LENGTH=1124
Repeat List (scaffold44)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40212.1	1	745	2025	16.74	745	46	5e-171
Target_name	Start	End	Length	Cov(%)
sp\|F6HCC0_VITVI	378	1105	1108	65.7

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40212.1	18	745	2025	15.11	728	40	8e-134
Target_name	Start	End	Length	Cov(%)
AT5G05570.1	389	1121	1124	65.21

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold44	Augustus	mRNA	22044	43084	.	+	.	ID=Dca40212.1;Parent=Dca40212
scaffold44	Augustus	exon	22044	22113	.	+	.	ID=Dca40212.1.exon1;Parent=Dca40212.1
scaffold44	Augustus	exon	23699	23774	.	+	.	ID=Dca40212.1.exon2;Parent=Dca40212.1
scaffold44	Augustus	exon	24032	24407	.	+	.	ID=Dca40212.1.exon3;Parent=Dca40212.1
scaffold44	Augustus	exon	24710	25045	.	+	.	ID=Dca40212.1.exon4;Parent=Dca40212.1
scaffold44	Augustus	exon	25142	25351	.	+	.	ID=Dca40212.1.exon5;Parent=Dca40212.1
scaffold44	Augustus	exon	25471	25569	.	+	.	ID=Dca40212.1.exon6;Parent=Dca40212.1
scaffold44	Augustus	exon	25660	25732	.	+	.	ID=Dca40212.1.exon7;Parent=Dca40212.1
scaffold44	Augustus	exon	25858	25985	.	+	.	ID=Dca40212.1.exon8;Parent=Dca40212.1
scaffold44	Augustus	exon	26325	26608	.	+	.	ID=Dca40212.1.exon9;Parent=Dca40212.1
scaffold44	Augustus	exon	26688	26949	.	+	.	ID=Dca40212.1.exon10;Parent=Dca40212.1
scaffold44	Augustus	exon	27198	27322	.	+	.	ID=Dca40212.1.exon11;Parent=Dca40212.1
scaffold44	Augustus	exon	27856	27973	.	+	.	ID=Dca40212.1.exon12;Parent=Dca40212.1
scaffold44	Augustus	exon	28273	28328	.	+	.	ID=Dca40212.1.exon13;Parent=Dca40212.1
scaffold44	Augustus	exon	28437	28533	.	+	.	ID=Dca40212.1.exon14;Parent=Dca40212.1
scaffold44	Augustus	exon	28926	29112	.	+	.	ID=Dca40212.1.exon15;Parent=Dca40212.1
scaffold44	Augustus	exon	29198	29266	.	+	.	ID=Dca40212.1.exon16;Parent=Dca40212.1
scaffold44	Augustus	exon	29342	29439	.	+	.	ID=Dca40212.1.exon17;Parent=Dca40212.1
scaffold44	Augustus	exon	29519	29602	.	+	.	ID=Dca40212.1.exon18;Parent=Dca40212.1
scaffold44	Augustus	exon	29728	29822	.	+	.	ID=Dca40212.1.exon19;Parent=Dca40212.1
scaffold44	Augustus	exon	31006	31381	.	+	.	ID=Dca40212.1.exon20;Parent=Dca40212.1
scaffold44	Augustus	exon	31728	32063	.	+	.	ID=Dca40212.1.exon21;Parent=Dca40212.1
scaffold44	Augustus	exon	32160	32369	.	+	.	ID=Dca40212.1.exon22;Parent=Dca40212.1
scaffold44	Augustus	exon	32489	32587	.	+	.	ID=Dca40212.1.exon23;Parent=Dca40212.1
scaffold44	Augustus	exon	32677	32749	.	+	.	ID=Dca40212.1.exon24;Parent=Dca40212.1
scaffold44	Augustus	exon	32875	33002	.	+	.	ID=Dca40212.1.exon25;Parent=Dca40212.1
scaffold44	Augustus	exon	33342	33625	.	+	.	ID=Dca40212.1.exon26;Parent=Dca40212.1
scaffold44	Augustus	exon	33705	33966	.	+	.	ID=Dca40212.1.exon27;Parent=Dca40212.1
scaffold44	Augustus	exon	34215	34339	.	+	.	ID=Dca40212.1.exon28;Parent=Dca40212.1
scaffold44	Augustus	exon	34873	34990	.	+	.	ID=Dca40212.1.exon29;Parent=Dca40212.1
scaffold44	Augustus	exon	35290	35345	.	+	.	ID=Dca40212.1.exon30;Parent=Dca40212.1
scaffold44	Augustus	exon	35454	35550	.	+	.	ID=Dca40212.1.exon31;Parent=Dca40212.1
scaffold44	Augustus	exon	35943	36129	.	+	.	ID=Dca40212.1.exon32;Parent=Dca40212.1
scaffold44	Augustus	exon	36215	36283	.	+	.	ID=Dca40212.1.exon33;Parent=Dca40212.1
scaffold44	Augustus	exon	36359	36456	.	+	.	ID=Dca40212.1.exon34;Parent=Dca40212.1
scaffold44	Augustus	exon	36536	36619	.	+	.	ID=Dca40212.1.exon35;Parent=Dca40212.1
scaffold44	Augustus	exon	36747	36841	.	+	.	ID=Dca40212.1.exon36;Parent=Dca40212.1
scaffold44	Augustus	exon	40264	40590	.	+	.	ID=Dca40212.1.exon37;Parent=Dca40212.1
scaffold44	Augus-PASA	exon	41638	41727	.	+	.	ID=Dca40212.1.exon38;Parent=Dca40212.1
scaffold44	Augus-PASA	exon	41847	41913	.	+	.	ID=Dca40212.1.exon39;Parent=Dca40212.1
scaffold44	Augus-PASA	exon	42002	42094	.	+	.	ID=Dca40212.1.exon40;Parent=Dca40212.1
scaffold44	Augus-PASA	exon	42197	42382	.	+	.	ID=Dca40212.1.exon41;Parent=Dca40212.1
scaffold44	Augus-PASA	exon	42491	42571	.	+	.	ID=Dca40212.1.exon42;Parent=Dca40212.1
scaffold44	Augus-PASA	exon	42700	42837	.	+	.	ID=Dca40212.1.exon43;Parent=Dca40212.1
scaffold44	Augus-PASA	exon	42920	43084	.	+	.	ID=Dca40212.1.exon44;Parent=Dca40212.1