Carnation DB

Dca40233.1

Annotation

29-exons
f-1
sp|B9RNX6_RICCO#Chromodomain helicase DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0921900#GO:0005634;GO:0005524;GO:0003677;GO:0004386;GO:0005506;GO:0016740;GO:0008270;GO:0006355#6F1P1C
Repeat List (scaffold44)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40233.1	1	1331	1344	70.46	1331	69	0
Target_name	Start	End	Length	Cov(%)
sp\|B9RNX6_RICCO	1	1356	1470	92.24

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40233.1	1	1305	1344	63.46	1305	64	0
Target_name	Start	End	Length	Cov(%)
AT2G25170.1	1	1308	1384	94.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold44	Augustus	mRNA	194941	208646	.	+	.	ID=Dca40233.1;Parent=Dca40233
scaffold44	Augustus	exon	194941	195084	.	+	.	ID=Dca40233.1.exon1;Parent=Dca40233.1
scaffold44	Augustus	exon	196147	196284	.	+	.	ID=Dca40233.1.exon2;Parent=Dca40233.1
scaffold44	Augustus	exon	196365	196519	.	+	.	ID=Dca40233.1.exon3;Parent=Dca40233.1
scaffold44	Augustus	exon	196667	196828	.	+	.	ID=Dca40233.1.exon4;Parent=Dca40233.1
scaffold44	Augustus	exon	197288	197529	.	+	.	ID=Dca40233.1.exon5;Parent=Dca40233.1
scaffold44	Augustus	exon	197926	198062	.	+	.	ID=Dca40233.1.exon6;Parent=Dca40233.1
scaffold44	Augustus	exon	198237	198446	.	+	.	ID=Dca40233.1.exon7;Parent=Dca40233.1
scaffold44	Augustus	exon	198584	198691	.	+	.	ID=Dca40233.1.exon8;Parent=Dca40233.1
scaffold44	Augustus	exon	199162	199212	.	+	.	ID=Dca40233.1.exon9;Parent=Dca40233.1
scaffold44	Augustus	exon	199317	199416	.	+	.	ID=Dca40233.1.exon10;Parent=Dca40233.1
scaffold44	Augustus	exon	200559	200701	.	+	.	ID=Dca40233.1.exon11;Parent=Dca40233.1
scaffold44	Augustus	exon	200790	200893	.	+	.	ID=Dca40233.1.exon12;Parent=Dca40233.1
scaffold44	Augustus	exon	201015	201153	.	+	.	ID=Dca40233.1.exon13;Parent=Dca40233.1
scaffold44	Augustus	exon	201297	201466	.	+	.	ID=Dca40233.1.exon14;Parent=Dca40233.1
scaffold44	Augustus	exon	202253	202319	.	+	.	ID=Dca40233.1.exon15;Parent=Dca40233.1
scaffold44	Augustus	exon	202530	202652	.	+	.	ID=Dca40233.1.exon16;Parent=Dca40233.1
scaffold44	Augustus	exon	203138	203244	.	+	.	ID=Dca40233.1.exon17;Parent=Dca40233.1
scaffold44	Augustus	exon	203357	203438	.	+	.	ID=Dca40233.1.exon18;Parent=Dca40233.1
scaffold44	Augustus	exon	203538	203735	.	+	.	ID=Dca40233.1.exon19;Parent=Dca40233.1
scaffold44	Augustus	exon	204274	204421	.	+	.	ID=Dca40233.1.exon20;Parent=Dca40233.1
scaffold44	Augustus	exon	204511	204613	.	+	.	ID=Dca40233.1.exon21;Parent=Dca40233.1
scaffold44	Augustus	exon	204731	204874	.	+	.	ID=Dca40233.1.exon22;Parent=Dca40233.1
scaffold44	Augustus	exon	205060	205121	.	+	.	ID=Dca40233.1.exon23;Parent=Dca40233.1
scaffold44	Augustus	exon	205209	205285	.	+	.	ID=Dca40233.1.exon24;Parent=Dca40233.1
scaffold44	Augustus	exon	206015	206145	.	+	.	ID=Dca40233.1.exon25;Parent=Dca40233.1
scaffold44	Augustus	exon	206236	206581	.	+	.	ID=Dca40233.1.exon26;Parent=Dca40233.1
scaffold44	Augustus	exon	207385	207508	.	+	.	ID=Dca40233.1.exon27;Parent=Dca40233.1
scaffold44	Augustus	exon	208091	208164	.	+	.	ID=Dca40233.1.exon28;Parent=Dca40233.1
scaffold44	Augustus	exon	208401	208646	.	+	.	ID=Dca40233.1.exon29;Parent=Dca40233.1