Carnation DB

Dca40258.1

Annotation

6-exons
f-1
sp|F6H3H6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g05580#unknown#0F0P0C
AT4G32270.1 | Symbols: | Ubiquitin-like superfamily protein | chr4:15575015-15576360 REVERSE LENGTH=239
Repeat List (scaffold44)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40258.1	34	202	225	39.11	169	52	2e-39
Target_name	Start	End	Length	Cov(%)
sp\|F6H3H6_VITVI	15	186	253	67.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40258.1	31	185	225	34.66	155	49	3e-37
Target_name	Start	End	Length	Cov(%)
AT4G32270.1	3	162	239	66.94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold44	Augustus	mRNA	393541	395823	.	-	.	ID=Dca40258.1;Parent=Dca40258
scaffold44	Augustus	exon	393541	393615	.	-	.	ID=Dca40258.1.exon1;Parent=Dca40258.1
scaffold44	Augustus	exon	393697	393784	.	-	.	ID=Dca40258.1.exon2;Parent=Dca40258.1
scaffold44	Augustus	exon	394184	394272	.	-	.	ID=Dca40258.1.exon3;Parent=Dca40258.1
scaffold44	Augustus	exon	394617	394716	.	-	.	ID=Dca40258.1.exon4;Parent=Dca40258.1
scaffold44	Augustus	exon	394809	394908	.	-	.	ID=Dca40258.1.exon5;Parent=Dca40258.1
scaffold44	Augustus	exon	395598	395823	.	-	.	ID=Dca40258.1.exon6;Parent=Dca40258.1