Carnation DB

Dca40265.1

Annotation

5-exons
f-1
sp|B9H570_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_558577#GO:0016021;GO:0005524;GO:0004674#2F0P1C
Os11t0569300-00 Serine/threonine protein kinase domain containing protein.
Repeat List (scaffold440)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40265.1	104	269	1222	4.41	166	33	4e-10
Target_name	Start	End	Length	Cov(%)
sp\|B9H570_POPTR	78	212	1011	13.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40265.1	1	117	1222	3.35	117	35	3e-07
Target_name	Start	End	Length	Cov(%)
Os11t0569300-00	557	671	1072	10.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold440	Augustus	mRNA	49408	55098	.	-	.	ID=Dca40265.1;Parent=Dca40265
scaffold440	Augustus	exon	49408	49989	.	-	.	ID=Dca40265.1.exon1;Parent=Dca40265.1
scaffold440	Augustus	exon	50226	51343	.	-	.	ID=Dca40265.1.exon2;Parent=Dca40265.1
scaffold440	Augustus	exon	52504	52914	.	-	.	ID=Dca40265.1.exon3;Parent=Dca40265.1
scaffold440	Augustus	exon	53049	54173	.	-	.	ID=Dca40265.1.exon4;Parent=Dca40265.1
scaffold440	Augustus	exon	54666	55098	.	-	.	ID=Dca40265.1.exon5;Parent=Dca40265.1