Carnation DB

Dca40341.1

Annotation

7-exons
f-1
sp|B9HYH3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_822351#GO:0008234;GO:0006508#1F1P0C
AT3G48480.1 | Symbols: | Cysteine proteinases superfamily protein | chr3:17957326-17959062 REVERSE LENGTH=298
Repeat List (scaffold4413)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40341.1	33	284	327	38.83	252	49	6e-64
Target_name	Start	End	Length	Cov(%)
sp\|B9HYH3_POPTR	33	291	298	86.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40341.1	23	290	327	35.16	268	41	4e-52
Target_name	Start	End	Length	Cov(%)
AT3G48480.1	25	298	298	91.94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4413	Augus-PASA	mRNA	6197	9925	.	-	.	ID=Dca40341.1;Parent=Dca40341
scaffold4413	Augus-PASA	exon	6197	6385	.	-	.	ID=Dca40341.1.exon1;Parent=Dca40341.1
scaffold4413	Augus-PASA	exon	6469	6582	.	-	.	ID=Dca40341.1.exon2;Parent=Dca40341.1
scaffold4413	Augus-PASA	exon	7415	7496	.	-	.	ID=Dca40341.1.exon3;Parent=Dca40341.1
scaffold4413	Augus-PASA	exon	7610	7738	.	-	.	ID=Dca40341.1.exon4;Parent=Dca40341.1
scaffold4413	Augus-PASA	exon	7844	8005	.	-	.	ID=Dca40341.1.exon5;Parent=Dca40341.1
scaffold4413	Augus-PASA	exon	8092	8323	.	-	.	ID=Dca40341.1.exon6;Parent=Dca40341.1
scaffold4413	Augus-PASA	exon	9850	9925	.	-	.	ID=Dca40341.1.exon7;Parent=Dca40341.1