Carnation DB

Dca40356.1

Annotation

8-exons
f-1
sp|B9I3M4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_570216#unknown#0F0P0C
Repeat List (scaffold4417)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40356.1	1	547	557	44.7	547	42	2e-92
Target_name	Start	End	Length	Cov(%)
sp\|B9I3M4_POPTR	1	558	562	99.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40356.1	171	547	557	23.87	377	36	1e-43
Target_name	Start	End	Length	Cov(%)
Os06t0609800-01	173	522	528	66.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4417	Augustus	mRNA	11735	16690	.	+	.	ID=Dca40356.1;Parent=Dca40356
scaffold4417	Augustus	exon	11735	12154	.	+	.	ID=Dca40356.1.exon1;Parent=Dca40356.1
scaffold4417	Augustus	exon	13971	14114	.	+	.	ID=Dca40356.1.exon2;Parent=Dca40356.1
scaffold4417	Augus-PASA	exon	14292	14390	.	+	.	ID=Dca40356.1.exon3;Parent=Dca40356.1
scaffold4417	Augus-PASA	exon	14604	14693	.	+	.	ID=Dca40356.1.exon4;Parent=Dca40356.1
scaffold4417	Augus-PASA	exon	14796	14924	.	+	.	ID=Dca40356.1.exon5;Parent=Dca40356.1
scaffold4417	Augustus	exon	15031	15171	.	+	.	ID=Dca40356.1.exon6;Parent=Dca40356.1
scaffold4417	Augustus	exon	15328	15666	.	+	.	ID=Dca40356.1.exon7;Parent=Dca40356.1
scaffold4417	Augustus	exon	16379	16690	.	+	.	ID=Dca40356.1.exon8;Parent=Dca40356.1