Dca40376.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold442)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40376.1 |
90 |
795 |
1195 |
30.29 |
706 |
48 |
4e-177
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
15 |
753 |
1717 |
43.04 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40376.1 |
796 |
1142 |
1195 |
11.21 |
347 |
38 |
1e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
73 |
431 |
591 |
60.74 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold442 |
Augustus |
mRNA |
31582 |
36026 |
. |
- |
. |
ID=Dca40376.1;Parent=Dca40376 |
| scaffold442 |
Augustus |
exon |
31582 |
31989 |
. |
- |
. |
ID=Dca40376.1.exon1;Parent=Dca40376.1 |
| scaffold442 |
Augustus |
exon |
32038 |
32825 |
. |
- |
. |
ID=Dca40376.1.exon2;Parent=Dca40376.1 |
| scaffold442 |
Augustus |
exon |
33497 |
34363 |
. |
- |
. |
ID=Dca40376.1.exon3;Parent=Dca40376.1 |
| scaffold442 |
Augustus |
exon |
34502 |
36026 |
. |
- |
. |
ID=Dca40376.1.exon4;Parent=Dca40376.1 |
