Carnation DB

Dca40377.1

Annotation

5-exons
f-1
sp|D7KEP4_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_890536#GO:0016272;GO:0051082;GO:0006457#1F1P1C
AT1G29990.1 | Symbols: PFD6 | prefoldin 6 | chr1:10507666-10508821 FORWARD LENGTH=129
Repeat List (scaffold442)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40377.1	1	130	130	83.84	130	84	8e-58
Target_name	Start	End	Length	Cov(%)
sp\|D7KEP4_ARALL	1	130	130	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40377.1	3	130	130	81.53	128	83	2e-57
Target_name	Start	End	Length	Cov(%)
AT1G29990.1	2	129	129	99.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold442	Augus-PASA	mRNA	39948	44355	.	+	.	ID=Dca40377.1;Parent=Dca40377
scaffold442	Augus-PASA	exon	39948	40026	.	+	.	ID=Dca40377.1.exon1;Parent=Dca40377.1
scaffold442	Augus-PASA	exon	40155	40225	.	+	.	ID=Dca40377.1.exon2;Parent=Dca40377.1
scaffold442	Augus-PASA	exon	40318	40442	.	+	.	ID=Dca40377.1.exon3;Parent=Dca40377.1
scaffold442	Augus-PASA	exon	41020	41080	.	+	.	ID=Dca40377.1.exon4;Parent=Dca40377.1
scaffold442	Augus-PASA	exon	44299	44355	.	+	.	ID=Dca40377.1.exon5;Parent=Dca40377.1