Dca40387.1
Annotation
- 2-exons
- f-1
- sp|Q850U9_ORYSJ#Putative gag-pol polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0037J17.27#GO:0003676#1F0P0C
- Repeat List (scaffold4420)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40387.1 |
3 |
198 |
202 |
66.83 |
196 |
64 |
2e-76
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q850U9_ORYSJ |
332 |
545 |
547 |
39.12 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40387.1 |
88 |
187 |
202 |
20.79 |
100 |
42 |
2e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1287 |
1384 |
1401 |
6.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4420 |
Augustus |
mRNA |
5525 |
6366 |
. |
+ |
. |
ID=Dca40387.1;Parent=Dca40387 |
| scaffold4420 |
Augustus |
exon |
5525 |
5786 |
. |
+ |
. |
ID=Dca40387.1.exon1;Parent=Dca40387.1 |
| scaffold4420 |
Augustus |
exon |
6020 |
6366 |
. |
+ |
. |
ID=Dca40387.1.exon2;Parent=Dca40387.1 |
